STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48636.1PFAM: Protein of unknown function DUF2550; KEGG: saq:Sare_4009 hypothetical protein. (151 aa)    
Predicted Functional Partners:
atpC
ATPase, F1 complex, delta/epsilon subunit-like; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.843
ADL48614.1
KEGG: stp:Strop_3617 hypothetical protein.
     
 0.711
nucS
Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
     
 0.711
ADL45148.1
KEGG: saq:Sare_1439 hypothetical protein.
  
     0.665
ADL44231.1
KEGG: saq:Sare_0660 hypothetical protein.
  
     0.654
ADL49763.1
KEGG: saq:Sare_5074 hypothetical protein.
  
     0.569
ADL43982.1
KEGG: saq:Sare_0466 transporter DMT superfamily protein; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane.
      
 0.563
ADL44762.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: stp:Strop_1128 ErfK/YbiS/YcfS/YnhG family protein.
  
     0.560
ADL44823.1
PFAM: Methionine synthase vitamin-B12 independent; KEGG: saq:Sare_1108 methionine synthase vitamin-B12 independent.
  
     0.533
ADL48638.1
KEGG: saq:Sare_4011 cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator.
       0.524
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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