STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48692.1KEGG: sna:Snas_2708 cellulose-binding family II; PFAM: cellulose-binding family II; Fibronectin type III domain protein; SMART: cellulose-binding family II; Fibronectin type III domain protein. (521 aa)    
Predicted Functional Partners:
ADL48693.1
KEGG: stp:Strop_3674 carbohydrate-binding family 6 protein; PFAM: Carbohydrate binding family 6; glycoside hydrolase family 16; SMART: cellulose binding type IV.
 
   
 0.747
ADL44360.1
KEGG: kfl:Kfla_7068 hypothetical protein.
  
     0.601
ADL45589.1
KEGG: kfl:Kfla_3828 glycoside hydrolase family 18; PFAM: glycoside hydrolase family 18; Ricin B lectin; SMART: chitinase II; Ricin B lectin; Belongs to the glycosyl hydrolase 18 family.
 
     0.577
ADL47124.1
KEGG: sco:SCO1292 secreted protein.
  
     0.551
ADL44663.1
PFAM: peptidase M7 snapalysin; KEGG: saq:Sare_3037 peptidase M7 snapalysin.
  
     0.478
ADL44514.1
SMART: regulatory protein ArsR; KEGG: sro:Sros_4515 putative transcriptional regulator, ArsR family.
  
     0.475
ADL46204.1
Regulatory protein ArsR; KEGG: scb:SCAB_9961 hypothetical protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
  
     0.475
ADL44601.1
PFAM: chitin-binding domain 3 protein; KEGG: sma:SAV_2168 secreted cellulose-binding protein.
  
     0.471
ADL46140.1
KEGG: kfl:Kfla_2909 N-acetylmuramoyl-L-alanine amidase family 2; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2.
  
     0.471
ADL48694.1
Membrane protein insertase, YidC/Oxa1 family; KEGG: sna:Snas_2255 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein.
 
     0.443
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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