STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48729.1KEGG: saq:Sare_4071 hypothetical protein. (59 aa)    
Predicted Functional Partners:
ADL48728.1
2-oxoglutarate dehydrogenase, E1 subunit; KEGG: saq:Sare_4070 alpha-ketoglutarate decarboxylase; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase central region; dehydrogenase E1 component; catalytic domain-containing protein of components of various dehydrogenase complexes.
       0.755
ADL48399.1
PFAM: Protein of unknown function DUF2344; KEGG: saq:Sare_3862 hypothetical protein.
  
     0.752
ADL48403.1
KEGG: saq:Sare_3863 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
  
     0.681
ADL48790.1
KEGG: saq:Sare_4115 hypothetical protein.
  
     0.504
ADL48005.1
PFAM: Methyltransferase type 12; KEGG: saq:Sare_3464 methyltransferase type 11.
  
     0.442
ADL48328.1
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: stp:Strop_3435 antibiotic biosynthesis monooxygenase.
  
     0.421
ADL44823.1
PFAM: Methionine synthase vitamin-B12 independent; KEGG: saq:Sare_1108 methionine synthase vitamin-B12 independent.
  
     0.410
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.