STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL48752.1KEGG: saq:Sare_4087 signal transduction histidine kinase; PFAM: histidine kinase dimerization/phosphoacceptor; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein. (530 aa)    
Predicted Functional Partners:
ADL47906.1
KEGG: saq:Sare_3378 response regulator receiver/ANTAR domain-containing protein; PFAM: response regulator receiver; ANTAR domain protein; SMART: response regulator receiver.
 
   
 0.880
ADL48753.1
KEGG: saq:Sare_4088 glutamine--fructose-6-phosphate transaminase (isomerizing); PFAM: sugar isomerase (SIS).
     
 0.705
whiB-2
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
   
 0.650
ADL48787.1
KEGG: stp:Strop_3731 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: Protein of unknown function DUF2342.
  
     0.648
whiB
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.644
ADL44957.1
PFAM: Protein of unknown function DUF2469; KEGG: stp:Strop_1313 hypothetical protein.
 
     0.599
whiB-3
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.538
ADL46744.1
SMART: regulatory protein MerR; KEGG: stp:Strop_2379 regulatory protein, MerR.
  
     0.518
ADL49118.1
ATP-binding region ATPase domain protein; KEGG: fre:Franean1_6522 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; CHASE3 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.
     
 0.510
ADL48754.1
PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: stp:Strop_3708 TPR repeat-containing protein.
       0.482
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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