STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0009COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: cef:CE2684 hypothetical protein; PFAM: AAA-4 family protein; SPTR: C0VWZ2 Transcriptional regulator; PFAM: Divergent AAA domain. (578 aa)    
Predicted Functional Partners:
Arch_1085
DEAD/DEAH box helicase domain protein; COGs: COG1200 RecG-like helicase; InterProIPR016027:IPR014021:IPR001650:IPR014001:IPR 004365:IPR011545; KEGG: xce:Xcel_2279 ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: D0WND1 Putative ATP-dependent DNA helicase RecG; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; OB-fold nucleic acid binding domain; TIGRFAM: ATP-dependent DNA helicase RecG.
    
  0.900
Arch_0228
LPXTG-motif cell wall anchor domain protein; InterPro IPR019931; KEGG: cdi:DIP0235 putative fimbrial subunit; SPTR: Q6NK05 Putative fimbrial subunit; TIGRFAM: LPXTG-motif cell wall anchor domain protein; TIGRFAM: LPXTG-motif cell wall anchor domain.
  
     0.585
Arch_1052
Restriction modification system DNA specificity domain protein; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: vei:Veis_1015 restriction modification system DNA specificity subunit; PFAM: restriction modification system DNA specificity domain; SPTR: B2N0G8 Putative type I restriction-modification system, S subunit; PFAM: Type I restriction modification DNA specificity domain.
  
    0.519
Arch_1051
Restriction modification system DNA specificity domain protein; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: bpt:Bpet3989 type I restriction-modification system, S subunit; PFAM: restriction modification system DNA specificity domain; SPTR: A9I6S0 Type I restriction-modification system, S subunit; manually curated; PFAM: Type I restriction modification DNA specificity domain.
  
    0.513
Arch_0229
COGs: COG3764 Sortase (surface protein transpeptidase); InterPro IPR005754; KEGG: cjk:jk1700 putative fimbrial associated sortase-like protein; PFAM: peptidase C60 sortase A and B; SPTR: Q4JTI0 Putative fimbrial associated sortase-like protein; TIGRFAM: sortase family protein; PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein.
  
     0.506
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
       0.465
Arch_0519
DNA methylase N-4/N-6 domain protein; COGs: COG0863 DNA modification methylase; InterProIPR002052:IPR002295:IPR003115:IPR002941:IPR 015840; KEGG: pac:PPA1586 ParB family DNA methylase; PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: C2KNX9 ParB family DNA methylase; manually curated; PFAM: ParB-like nuclease domain; DNA methylase.
       0.463
Arch_0010
Coagulation factor 5/8 type domain protein; COGs: COG1196 Chromosome segregation ATPase; InterPro IPR000421:IPR008979; KEGG: cai:Caci_5658 ricin B lectin; PFAM: coagulation factor 5/8 type domain protein; SPTR: C7QC69 Ricin B lectin; PFAM: F5/8 type C domain.
       0.440
Arch_0024
LPXTG-motif cell wall anchor domain protein; InterPro IPR001899:IPR019931; KEGG: cur:cur_1898 putative surface-anchored protein (fimbrial subunit); SPTR: C2BJ18 Fimbrial subunit; TIGRFAM: LPXTG-motif cell wall anchor domain protein; TIGRFAM: LPXTG-motif cell wall anchor domain.
  
     0.408
Arch_0077
InterPro IPR018674; KEGG: lxx:Lxx05060 hypothetical protein; PFAM: Protein of unknown function DUF2142, membrane; SPTR: A7BEE9 Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2142).
  
     0.407
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.