STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0010Coagulation factor 5/8 type domain protein; COGs: COG1196 Chromosome segregation ATPase; InterPro IPR000421:IPR008979; KEGG: cai:Caci_5658 ricin B lectin; PFAM: coagulation factor 5/8 type domain protein; SPTR: C7QC69 Ricin B lectin; PFAM: F5/8 type C domain. (982 aa)    
Predicted Functional Partners:
Arch_0033
Conserved hypothetical protein; InterPro IPR013781:IPR017853; KEGG: bfa:Bfae_10930 hypothetical protein; SPTR: C7MBG8 Putative uncharacterized protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.653
Arch_0617
LPXTG-motif cell wall anchor domain protein; InterPro IPR005519:IPR019931; KEGG: cai:Caci_5772 acid phosphatase (class B); PFAM: acid phosphatase (Class B); SPTR: B5HR56 Secreted protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: HAD superfamily, subfamily IIIB (Acid phosphatase); TIGRFAM: LPXTG-motif cell wall anchor domain.
 
     0.599
Arch_0158
Glycoside hydrolase, family 20, catalytic core; COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR015883:IPR013781:IPR017853:IPR001540; KEGG: sco:SCO4860 secreted hydrolase; PFAM: Glycoside hydrolase, family 20, catalytic core; SPTR: C8P1S6 Lacto-N-biosidase; PFAM: Glycosyl hydrolase family 20, catalytic domain.
  
 
   0.595
Arch_0016
Hypothetical protein; InterPro IPR016181; KEGG: cai:Caci_8064 GCN5-related N-acetyltransferase; SPTR: C0UD33 Acetyltransferase (GNAT) family protein.
 
    0.589
Arch_0393
UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR002121:IPR014016:IPR014017:IPR000212; KEGG: bcv:Bcav_2897 UvrD/REP helicase; PFAM: UvrD/REP helicase; HRDC domain protein; SMART: HRDC domain protein; SPTR: D0WRX3 ATP-dependent DNA helicase II; PFAM: HRDC domain; UvrD/REP helicase.
  
 
 0.577
Arch_0877
Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.567
Arch_1468
Abortive infection protein; InterPro IPR003675; KEGG: bcz:BCZK3196 CAAX amino terminal protease family protein; PFAM: Abortive infection protein; SPTR: C7GD25 Putative membrane spanning protein; PFAM: CAAX amino terminal protease family.
 
   
 0.566
Arch_0394
KEGG: bcv:Bcav_2892 hypothetical protein; SPTR: D0WRX4 UBA/THIF-type NAD/FAD binding fold protein.
  
 
 0.556
Arch_0413
InterPro IPR003838; KEGG: bcv:Bcav_2825 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: C5V906 ABC transporter integral membrane protein; PFAM: Predicted permease.
  
     0.539
Arch_1121
COGs: COG0627 esterase; InterPro IPR000801; KEGG: cgt:cgR_1064 hypothetical protein; PFAM: putative esterase; SPTR: C2KS46 Esterase; PFAM: Putative esterase.
  
     0.526
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.