STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0032COGs: COG3764 Sortase (surface protein transpeptidase); InterPro IPR005754; KEGG: cdi:DIP2225 putative fimbrial associated sortase-like protein; PFAM: peptidase C60 sortase A and B; SPTR: C2CUX9 Sortase (Surface protein transpeptidase); TIGRFAM: sortase family protein; PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein. (291 aa)    
Predicted Functional Partners:
Arch_0031
LPXTG-motif cell wall anchor domain protein; InterPro IPR008454:IPR019948:IPR001899:IPR019931; KEGG: cdi:DIP0235 putative fimbrial subunit; PFAM: Gram-positive anchor; Cna B domain protein; SPTR: Q1G4W1 Type-2 fimbrial major subunit; TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: Gram positive anchor; TIGRFAM: LPXTG-motif cell wall anchor domain.
 
   
 0.892
Arch_0024
LPXTG-motif cell wall anchor domain protein; InterPro IPR001899:IPR019931; KEGG: cur:cur_1898 putative surface-anchored protein (fimbrial subunit); SPTR: C2BJ18 Fimbrial subunit; TIGRFAM: LPXTG-motif cell wall anchor domain protein; TIGRFAM: LPXTG-motif cell wall anchor domain.
 
   
 0.785
Arch_0023
LPXTG-motif cell wall anchor domain protein; InterPro IPR008454:IPR019931; KEGG: car:cauri_0187 surface-anchored fimbrial subunit; PFAM: Cna B domain protein; SPTR: A7BA22 Putative uncharacterized protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: Cna protein B-type domain; TIGRFAM: LPXTG-motif cell wall anchor domain.
 
   
 0.762
Arch_0228
LPXTG-motif cell wall anchor domain protein; InterPro IPR019931; KEGG: cdi:DIP0235 putative fimbrial subunit; SPTR: Q6NK05 Putative fimbrial subunit; TIGRFAM: LPXTG-motif cell wall anchor domain protein; TIGRFAM: LPXTG-motif cell wall anchor domain.
 
   
 0.759
Arch_0030
Hypothetical protein; KEGG: car:cauri_0187 surface-anchored fimbrial subunit; SPTR: C1RFM0 Putative uncharacterized protein.
 
   
 0.708
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.