STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0050Microcystin LR degradation protein MlrC; COGs: COG5476 conserved hypothetical protein; InterPro IPR015995:IPR010799:IPR009197; KEGG: pac:PPA2061 hypothetical protein; PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; SPTR: Q6A639 Conserved protein; PFAM: MlrC C-terminus; Protein of unknown function (DUF1485). (505 aa)    
Predicted Functional Partners:
Arch_0052
Extracellular solute-binding protein family 5; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: pac:PPA2063 putative peptide-binding transport protein; PFAM: extracellular solute-binding protein family 5; SPTR: C0W0N7 Peptide-binding transport protein; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
 
     0.796
Arch_0057
COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933:IPR013781:IPR016286:IPR017853; KEGG: pac:PPA2070 alpha-L-fucosidase precursor; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); PRIAM: Alpha-L-fucosidase; SMART: glycoside hydrolase family 29 (alpha-L-fucosidase); SPTR: Q6A632 Alpha-L-fucosidase; PFAM: Alpha-L-fucosidase.
 
     0.752
Arch_0051
ROK family protein; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: pac:PPA2062 ROK family transcriptional regulator; PFAM: ROK family protein; SPTR: Q6A638 Transcriptional regulator, ROK family; PFAM: ROK family; IclR helix-turn-helix domain.
       0.720
Arch_0058
CutC family protein; COGs: COG3142 Uncharacterized protein involved in copper resistance; InterPro IPR005627; KEGG: sma:SAV_3917 homeostasis protein; PFAM: CutC family protein; SPTR: Q82GI0 Putative homeostasis protein; PFAM: CutC family; Belongs to the CutC family.
 
     0.537
Arch_1487
Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917:IPR017849:IPR017850; KEGG: bfa:Bfae_28950 arylsulfatase A family protein; PFAM: sulfatase; SPTR: C0W1U3 Sulfatase; PFAM: Sulfatase.
  
     0.492
Arch_0497
Glycoside hydrolase family 29 (alpha-L-fucosidase); COGs: COG3669 Alpha-L-fucosidase; InterPro IPR013781:IPR000933:IPR017853:IPR016286; KEGG: pac:PPA0607 glycosyl hydrolase, putative alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); SMART: glycoside hydrolase family 29 (alpha-L-fucosidase); SPTR: Q6AA53 Glycosyl hydrolase, putative alpha-L-fucosidase; PFAM: Alpha-L-fucosidase.
 
     0.461
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.