STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0094InterPro IPR000620; KEGG: ccu:Ccur_08310 integral membrane protein DUF6; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C0W8F3 Integral membrane protein; PFAM: EamA-like transporter family. (320 aa)    
Predicted Functional Partners:
Arch_0083
Transcriptional regulator, MarR family; COGs: COG4750 CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes; InterPro IPR000835:IPR002573:IPR011009; KEGG: apv:Apar_1003 transcriptional regulator, MarR family; PFAM: Choline/ethanolamine kinase; regulatory protein MarR; SPTR: A7BEG2 Putative uncharacterized protein; PFAM: Choline/ethanolamine kinase; Nucleotidyl transferase.
 
  
 0.900
Arch_0085
InterPro IPR002797; KEGG: apv:Apar_0999 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: C0W8F7 Putative uncharacterized protein; PFAM: Polysaccharide biosynthesis protein.
  
  
 0.554
Arch_0092
Rhamnosyltransferase; COGs: COG1216 glycosyltransferase; InterPro IPR001173:IPR006446; KEGG: ajs:Ajs_0541 rhamnosyltransferase; PFAM: glycosyl transferase family 2; SPTR: D0WPJ2 Rhamnosyltransferase; TIGRFAM: rhamnosyltransferase; PFAM: Glycosyl transferase family 2; TIGRFAM: L-rhamnosyltransferase.
       0.548
Arch_0093
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
       0.548
Arch_0095
KEGG: rsa:RSal33209_0014 hypothetical protein; SPTR: A9WR40 Putative uncharacterized protein.
   
   0.512
Arch_0081
LicD family protein; COGs: COG3475 LPS biosynthesis protein; InterPro IPR007074; KEGG: apv:Apar_1000 LicD family protein; PFAM: LicD family protein; SPTR: C0W8F2 Possible lipopolysaccharide cholinephosphotransferase; PFAM: LICD Protein Family.
 
   
 0.429
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.