STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0136SNARE associated Golgi protein-like protein; COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: sro:Sros_4049 alkaline phosphatase; PFAM: SNARE associated Golgi protein; SPTR: C4ELT3 Uncharacterized membrane-associated protein; PFAM: SNARE associated Golgi protein. (219 aa)    
Predicted Functional Partners:
Arch_0137
Membrane protein of unknown function; COGs: COG1950 membrane protein; InterPro IPR007165; KEGG: bcv:Bcav_3970 membrane protein of unknown function; PFAM: membrane protein of unknown function; SPTR: C5C571 Putative uncharacterized protein; PFAM: Membrane protein of unknown function.
       0.781
Arch_0138
KEGG: jde:Jden_2483 hypothetical protein; SPTR: D0WKD9 Putative membrane protein.
       0.737
Arch_1035
SNARE associated Golgi protein-like protein; COGs: COG0586 membrane-associated protein; InterPro IPR010916:IPR015414; KEGG: car:cauri_1244 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: C3PG83 Putative membrane protein; PFAM: SNARE associated Golgi protein.
  
     0.737
Arch_0139
KEGG: bcv:Bcav_2625 hypothetical protein; SPTR: D0WKD8 Putative uncharacterized protein.
       0.733
Arch_0135
KEGG: stp:Strop_4046 hypothetical protein; SPTR: D0WKF3 Putative uncharacterized protein.
       0.601
aroD
3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.
       0.500
Arch_0134
InterPro IPR006121:IPR017969; KEGG: mlu:Mlut_21360 copper chaperone; PFAM: Heavy metal transport/detoxification protein; SPTR: C0W4J0 MerTP family Hg2+ permease, binding protein; PFAM: Heavy-metal-associated domain.
       0.455
Arch_0133
Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR006121:IPR008250:IPR005834:IPR006403:IPR 006416:IPR001757:IPR018303:IPR017969:IPR000150; KEGG: jde:Jden_2501 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: D0WKF6 Copper-exporting ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Heavy [...]
       0.454
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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