STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Arch_0161Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: pac:PPA1454 solute-binding protein of transport system; PFAM: extracellular solute-binding protein family 1; SPTR: Q6A7R3 Solute-binding protein of transport system; PFAM: Bacterial extracellular solute-binding protein. (429 aa)    
Predicted Functional Partners:
Arch_0160
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: bfa:Bfae_10960 carbohydrate ABC transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C7MBH1 Carbohydrate ABC transporter membrane protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.998
Arch_0159
Binding-protein-dependent transport systems inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: bfa:Bfae_10970 carbohydrate ABC transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C7MBH2 Carbohydrate ABC transporter membrane protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.993
Arch_0495
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: lxx:Lxx23450 ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A7B9K3 Putative uncharacterized protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.986
Arch_0496
Binding-protein-dependent transport systems inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: pac:PPA0606 putative transport system permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q6AA54 Putative transport system permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.963
Arch_1643
ABC transporter related protein; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR017871:IPR003593:IPR008995:IPR003439; KEGG: xce:Xcel_2950 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0W453 Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter; Belongs to the ABC transporter superfamily.
  
 
 0.942
Arch_0494
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: pac:PPA0604 putative sugar binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: A7B9K4 Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding protein.
  
  
 
0.926
Arch_0158
Glycoside hydrolase, family 20, catalytic core; COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR015883:IPR013781:IPR017853:IPR001540; KEGG: sco:SCO4860 secreted hydrolase; PFAM: Glycoside hydrolase, family 20, catalytic core; SPTR: C8P1S6 Lacto-N-biosidase; PFAM: Glycosyl hydrolase family 20, catalytic domain.
 
     0.807
Arch_0033
Conserved hypothetical protein; InterPro IPR013781:IPR017853; KEGG: bfa:Bfae_10930 hypothetical protein; SPTR: C7MBG8 Putative uncharacterized protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
     0.779
Arch_0195
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: blo:BL1639 permease of ABC transporter for sugars; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C0W275 Sugar ABC superfamily ATP binding cassette transporter, permease; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.774
Arch_0196
COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: pac:PPA2293 binding-protein-dependent transport system; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C0W276 Sugar ABC superfamily ATP binding cassette transporter, membrane protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.764
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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