STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0194Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: pac:PPA2295 solute-binding lipoprotein; PFAM: extracellular solute-binding protein family 1; SPTR: C0W274 ABC superfamily ATP binding cassette transporter, solute-binding lipoprotein; PFAM: Bacterial extracellular solute-binding protein. (439 aa)    
Predicted Functional Partners:
Arch_0196
COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: pac:PPA2293 binding-protein-dependent transport system; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C0W276 Sugar ABC superfamily ATP binding cassette transporter, membrane protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.944
Arch_0195
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: blo:BL1639 permease of ABC transporter for sugars; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C0W275 Sugar ABC superfamily ATP binding cassette transporter, permease; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.941
Arch_1643
ABC transporter related protein; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR017871:IPR003593:IPR008995:IPR003439; KEGG: xce:Xcel_2950 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0W453 Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter; Belongs to the ABC transporter superfamily.
  
 
 0.868
Arch_0160
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: bfa:Bfae_10960 carbohydrate ABC transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C7MBH1 Carbohydrate ABC transporter membrane protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 
 0.738
Arch_0495
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: lxx:Lxx23450 ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A7B9K3 Putative uncharacterized protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 
 0.738
Arch_0159
Binding-protein-dependent transport systems inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: bfa:Bfae_10970 carbohydrate ABC transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C7MBH2 Carbohydrate ABC transporter membrane protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 
 0.687
Arch_0496
Binding-protein-dependent transport systems inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: pac:PPA0606 putative transport system permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q6AA54 Putative transport system permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 
 0.687
Arch_0380
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: bcv:Bcav_1782 fructose-bisphosphate aldolase; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C0W248 Maltose ABC superfamily ATP binding cassette transporter, membrane protein MalF; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.674
Arch_1772
KEGG: pac:PPA1569 hypothetical protein; SPTR: C0W0X9 Putative uncharacterized protein.
  
     0.672
Arch_0013
Conserved hypothetical protein; InterPro IPR012711; KEGG: blj:BLD_1765 Lacto-N-biose phosphorylase; PFAM: conserved hypothetical protein; SPTR: B3DQH2 Lacto-N-biose phosphorylase; PFAM: Lacto-N-biose phosphorylase; TIGRFAM: conserved hypothetical protein TIGR02336.
 
     0.623
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.