STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0205KEGG: kra:Krad_4039 hypothetical protein; SPTR: D0WLU3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3073). (78 aa)    
Predicted Functional Partners:
Arch_0214
KEGG: bcv:Bcav_3430 hypothetical protein; SPTR: D0WM32 Putative uncharacterized protein.
  
     0.535
crgA
Protein of unknown function UPF0233; Involved in cell division; Belongs to the CrgA family.
  
     0.522
Arch_0007
KEGG: kra:Krad_0008 hypothetical protein; SPTR: D0WL02 Putative integral membrane protein; PFAM: Transmembrane domain of unknown function (DUF3566).
  
     0.511
Arch_0129
Protein of unknown function DUF2183; COGs: COG4850 conserved hypothetical protein; InterPro IPR019236; KEGG: cgl:NCgl2176 hypothetical protein; PFAM: Protein of unknown function DUF2183; SPTR: D0WKK5 ABC transporter, ATP-binding protein; PFAM: Uncharacterized conserved protein (DUF2183).
  
     0.462
Arch_1431
Protein of unknown function DUF885; COGs: COG4805 conserved hypothetical protein; InterPro IPR010281; KEGG: bcv:Bcav_1144 protein of unknown function DUF885; PFAM: protein of unknown function DUF885; SPTR: D0WPL9 Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF885).
  
     0.457
Arch_1747
KEGG: bcv:Bcav_0374 hypothetical protein; SPTR: D0WK91 Putative uncharacterized protein.
  
     0.443
Arch_0206
InterPro IPR000551:IPR010093:IPR009061; KEGG: jde:Jden_2349 DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; SPTR: C7R2J2 DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: MerR family regulatory protein; TIGRFAM: DNA binding domain, excisionase family.
       0.440
Arch_1614
KEGG: bcv:Bcav_0899 DNA helicase; SPTR: D0WJR7 Putative uncharacterized protein.
  
     0.436
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.