STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0224Domain of unknown function DUF1794; May play a role in the intracellular transport of hydrophobic ligands; Belongs to the UPF0678 family. (197 aa)    
Predicted Functional Partners:
Arch_0223
KEGG: bcv:Bcav_3418 hypothetical protein; SPTR: C5C235 Putative uncharacterized protein.
 
     0.874
Arch_0225
Folate-binding protein YgfZ; COGs: COG0354 aminomethyltransferase related to GcvT; InterPro IPR006222:IPR017703; KEGG: xce:Xcel_3028 folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); SPTR: C0W5Y9 Glycine cleavage T protein (Aminomethyl transferase); TIGRFAM: folate-binding protein YgfZ; PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: folate-binding protein YgfZ.
 
    0.861
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.822
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
 
  
 0.726
Arch_0767
KEGG: nca:Noca_2946 hypothetical protein; SPTR: D0WQI8 Putative uncharacterized protein.
  
     0.723
Arch_0449
KEGG: bcv:Bcav_2645 putative transcriptional regulator, TetR family; SPTR: D0WRE6 Putative ATP/GTP-binding protein; PFAM: Dynamin family.
  
     0.682
Arch_1294
Hypothetical protein; KEGG: xce:Xcel_0736 PE-PGRS family protein; SPTR: D0WNV5 Putative uncharacterized protein.
  
     0.680
Arch_0450
Hypothetical protein; KEGG: bcv:Bcav_2644 ATP-binding membrane protein; SPTR: D0WRE5 Putative ATP-binding membrane protein; PFAM: Elongation factor Tu GTP binding domain.
 
    0.605
Arch_0255
KEGG: xce:Xcel_2983 hypothetical protein; SPTR: D1BZ92 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3180).
  
     0.583
Arch_0817
KEGG: xce:Xcel_1661 hypothetical protein; SPTR: D0WQG1 Putative uncharacterized protein.
  
     0.569
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.