STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0245KEGG: stp:Strop_4344 protein kinase; SPTR: Q5ZP17 CcV1 protein. (156 aa)    
Predicted Functional Partners:
Arch_0244
PKD domain containing protein; InterProIPR000601:IPR001087:IPR013831:IPR002035:IPR 013830; KEGG: pac:PPA1665 hypothetical protein; PFAM: PKD domain containing protein; lipolytic protein G-D-S-L family; SMART: PKD domain containing protein; SPTR: C0VY99 Putative uncharacterized protein; PFAM: GDSL-like Lipase/Acylhydrolase; PKD domain.
       0.782
Arch_0243
Alpha/beta hydrolase fold protein; COGs: COG2267 Lysophospholipase; InterPro IPR000073; KEGG: jde:Jden_2115 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: D0WMB4 Hydrolase, alpha/beta fold family domain protein; PFAM: alpha/beta hydrolase fold.
       0.598
Arch_0246
NLP/P60 protein; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: blt:Balat_0454 cell wall-associated hydrolase; PFAM: NLP/P60 protein; SPTR: D0WMB9 Putative NLP/P60 family protein; PFAM: NlpC/P60 family.
       0.490
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.