STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0246NLP/P60 protein; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: blt:Balat_0454 cell wall-associated hydrolase; PFAM: NLP/P60 protein; SPTR: D0WMB9 Putative NLP/P60 family protein; PFAM: NlpC/P60 family. (509 aa)    
Predicted Functional Partners:
Arch_1219
Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 0.847
Arch_0942
KEGG: kra:Krad_3145 hypothetical protein; SPTR: D0WMI9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3186).
   
 
 0.755
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
 
 0.638
Arch_0244
PKD domain containing protein; InterProIPR000601:IPR001087:IPR013831:IPR002035:IPR 013830; KEGG: pac:PPA1665 hypothetical protein; PFAM: PKD domain containing protein; lipolytic protein G-D-S-L family; SMART: PKD domain containing protein; SPTR: C0VY99 Putative uncharacterized protein; PFAM: GDSL-like Lipase/Acylhydrolase; PKD domain.
  
  
 0.509
Arch_0245
KEGG: stp:Strop_4344 protein kinase; SPTR: Q5ZP17 CcV1 protein.
       0.490
Arch_0865
Hypothetical protein; KEGG: tcu:Tcur_2317 transcriptional regulator-like protein; SPTR: D0WMW9 Putative uncharacterized protein.
  
     0.444
Arch_0755
Lytic transglycosylase catalytic; InterPro IPR002482:IPR018392:IPR008258; KEGG: rsa:RSal33209_2511 putative endopeptidase LytE precursor; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: D0WQK8 Putative LysM domain protein; PFAM: Transglycosylase SLT domain; LysM domain.
 
  
 0.409
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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