STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0270InterPro IPR001647:IPR012287:IPR009057; KEGG: cur:cur_0019 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C5VFG3 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (180 aa)    
Predicted Functional Partners:
Arch_0271
Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: cgt:cgR_2515 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: A4QH10 Putative uncharacterized protein; PFAM: Major Facilitator Superfamily.
 
  
 0.905
Arch_0269
HhH-GPD family protein; COGs: COG1194 A/G-specific DNA glycosylase; InterProIPR003265:IPR003583:IPR003651:IPR011257:IPR 004036; KEGG: bcv:Bcav_3282 HhH-GPD family protein; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; SMART: HhH-GPD family protein; Helix-hairpin-helix DNA-binding class 1; SPTR: D0WM02 A/G-specific adenine glycosylase; PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase.
       0.782
Arch_0272
Major facilitator superfamily MFS_1; InterPro IPR011701:IPR016196:IPR005829; KEGG: smt:Smal_1070 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: D0XPS3 Major facilitator superfamily MFS_1; PFAM: Sugar (and other) transporter; Major Facilitator Superfamily.
       0.678
Arch_1468
Abortive infection protein; InterPro IPR003675; KEGG: bcz:BCZK3196 CAAX amino terminal protease family protein; PFAM: Abortive infection protein; SPTR: C7GD25 Putative membrane spanning protein; PFAM: CAAX amino terminal protease family.
  
     0.457
Arch_0273
Conserved hypothetical protein; COGs: COG4637 ATPase; KEGG: aav:Aave_2264 hypothetical protein; SPTR: B5W7M4 SMC domain protein.
       0.453
Arch_0274
KEGG: ajs:Ajs_4079 hypothetical protein; SPTR: B5W7M3 Putative uncharacterized protein.
       0.453
Arch_0949
KEGG: jde:Jden_1121 hypothetical protein; SPTR: C7R3S0 Putative uncharacterized protein.
  
 
 
 0.400
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.