STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0310COGs: COG1487 nucleic acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: xce:Xcel_1526 PilT protein domain protein; PFAM: PilT protein domain protein; SPTR: D1BS64 PilT protein domain protein; PFAM: PIN domain. (137 aa)    
Predicted Functional Partners:
Arch_0311
KEGG: mtc:MT2002 hypothetical protein; SPTR: Q8VJT9 Putative uncharacterized protein.
   
 
 0.912
Arch_0980
KEGG: ngk:NGK_0895 trafficking protein B; SPTR: C2CT09 PilT protein domain protein; PFAM: PIN domain.
  
     0.773
Arch_0342
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.473
Arch_0312
KEGG: bcv:Bcav_1253 hypothetical protein; SPTR: D0WRM8 Putative uncharacterized protein.
       0.459
Arch_0313
Peptidoglycan-binding lysin domain protein; InterPro IPR018392:IPR002482; KEGG: tte:TTE1337 LysM repeat-containing protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Q8RA91 LysM-repeat proteins and domains; PFAM: LysM domain.
       0.459
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.