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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0339KEGG: pac:PPA1037 hypothetical protein; SPTR: C0W060 Putative uncharacterized protein. (341 aa)    
Predicted Functional Partners:
Arch_0338
KEGG: cbb:CLD_3775 hypothetical protein; SPTR: C0W061 Membrane protein.
 
     0.899
Arch_0340
KEGG: cbt:CLH_1579 hypothetical protein; SPTR: D0YSP8 Membrane protein.
 
     0.788
Arch_1537
COGs: COG4722 Phage-related protein; KEGG: bce:BC2595 GP13 protein; SPTR: C2KNW0 Conserved bacteriophage protein; PFAM: Phage tail protein.
  
     0.662
Arch_0764
Hypothetical protein; InterPro IPR016181:IPR000182; KEGG: bcv:Bcav_1925 GCN5-related protein N-acetyltransferase; SPTR: C1RL77 Acetyltransferase (GNAT) family protein.
  
    0.590
Arch_0265
Glycerol-3-phosphate dehydrogenase, anaerobic, C subunit; COGs: COG0247 Fe-S oxidoreductase; InterProIPR001450:IPR004017:IPR012285:IPR017896:IPR 017753:IPR009051:IPR017900; KEGG: pac:PPA2248 sn-glycerol-3-phosphate dehydrogenase subunit C; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: C2BV29 sn-glycerol-3-phosphate dehydrogenase subunit C; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit; PFAM: Cysteine-rich domain; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit.
  
     0.563
Arch_0266
Glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; COGs: COG3075 Anaerobic glycerol-3-phosphate dehydrogenase; InterPro IPR003953:IPR009158; KEGG: pac:PPA2249 anaerobic glycerol-3-phosphate dehydrogenase subunit B; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PRIAM: Glycerol-3-phosphate dehydrogenase; SPTR: D0YR90 Glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; PFAM: FAD binding domain; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit.
  
     0.560
Arch_0077
InterPro IPR018674; KEGG: lxx:Lxx05060 hypothetical protein; PFAM: Protein of unknown function DUF2142, membrane; SPTR: A7BEE9 Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2142).
  
     0.534
Arch_1754
KEGG: bcv:Bcav_0376 hypothetical protein; SPTR: C0VY58 Putative uncharacterized protein.
  
     0.531
Arch_0628
LPXTG-motif cell wall anchor domain protein; COGs: COG4886 Leucine-rich repeat (LRR) protein; InterPro IPR007331:IPR019931; KEGG: pac:PPA0779 putative for Fe-transport; PFAM: Htaa domain protein; SPTR: C0W1M4 Putative uncharacterized protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: Htaa.
  
     0.530
Arch_0242
KEGG: xce:Xcel_3007 hypothetical protein; SPTR: A7BBM1 Putative uncharacterized protein.
  
     0.499
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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