STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0379Extracellular solute-binding protein family 1; COGs: COG2182 Maltose-binding periplasmic protein/domains; InterPro IPR006060:IPR006059; KEGG: bcv:Bcav_1781 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: C0W247 Periplasmic maltose-binding protein; PFAM: Bacterial extracellular solute-binding protein. (410 aa)    
Predicted Functional Partners:
Arch_0381
COGs: COG3833 ABC-type maltose transport systems permease component; InterPro IPR000515; KEGG: bcv:Bcav_1783 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C0W249 Maltose/maltodextrin ABC superfamily ATP binding cassette transporter, membrane protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.999
Arch_0380
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: bcv:Bcav_1782 fructose-bisphosphate aldolase; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C0W248 Maltose ABC superfamily ATP binding cassette transporter, membrane protein MalF; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.996
Arch_1643
ABC transporter related protein; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR017871:IPR003593:IPR008995:IPR003439; KEGG: xce:Xcel_2950 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0W453 Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter; Belongs to the ABC transporter superfamily.
  
 0.994
Arch_0195
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: blo:BL1639 permease of ABC transporter for sugars; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C0W275 Sugar ABC superfamily ATP binding cassette transporter, permease; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.805
Arch_1458
PTS system, glucose subfamily, IIA subunit; COGs: COG1263 Phosphotransferase system IIC components glucose/maltose/N-acetylglucosamine-specific; InterProIPR001127:IPR001996:IPR013013:IPR018113:IPR 003352:IPR011055; KEGG: cdi:DIP1151 PTS system, glucose-specific IIABC component; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase; SPTR: C2CRZ1 Protein-N(Pi)-phosphohistidine--sugar phosphotransferase; TIGRFAM: PTS system, glucose subfamil [...]
   
  
 0.784
Arch_0160
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: bfa:Bfae_10960 carbohydrate ABC transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C7MBH1 Carbohydrate ABC transporter membrane protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 
 0.771
Arch_0495
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: lxx:Lxx23450 ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A7B9K3 Putative uncharacterized protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 
 0.771
Arch_0377
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR013781:IPR006047:IPR006589:IPR017853; KEGG: cdi:DIP0532 putative amylase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Q6NJ80 Putative amylase; PFAM: Alpha amylase, catalytic domain.
 
  
 0.674
Arch_0469
COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR013781:IPR003385:IPR017853; KEGG: bcv:Bcav_2633 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; PRIAM: 4-alpha-glucanotransferase; SPTR: D0WRE1 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: 4-alpha-glucanotransferase; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; 4-alpha-glucanotransferase.
  
  
 0.598
Arch_0729
COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146:IPR014746; KEGG: jde:Jden_1487 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: D0WQP4 Glutamate--ammonia ligase; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I.
    
 
 0.550
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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