STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0395COGs: COG5282 conserved hypothetical protein; InterPro IPR018766; KEGG: bcv:Bcav_2890 hypothetical protein; PFAM: Protein of unknown function DUF2342; SPTR: D0WRX5 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: conserved hypothetical protein. (453 aa)    
Predicted Functional Partners:
Arch_0394
KEGG: bcv:Bcav_2892 hypothetical protein; SPTR: D0WRX4 UBA/THIF-type NAD/FAD binding fold protein.
 
     0.728
Arch_0396
Conserved hypothetical protein; COGs: COG3480 secreted protein containing a PDZ domain; InterPro IPR020568; KEGG: cms:CMS_1888 hypothetical protein; SPTR: D0WRX7 Pdz/dhr/glgf protein; PFAM: Lon protease (S16) C-terminal proteolytic domain.
 
     0.707
clpP-2
Endopeptidase Clp; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
   
  
 0.693
Arch_0733
KEGG: mlu:Mlut_13380 hypothetical protein; SPTR: D0WQN5 Integral membrane protein.
  
     0.673
Arch_1420
KEGG: bcv:Bcav_1215 hypothetical protein; SPTR: D0WPH8 Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function (DUF3499).
  
     0.658
Arch_0771
KEGG: bcv:Bcav_1935 hypothetical protein; SPTR: D0WQI4 Putative uncharacterized protein.
  
     0.653
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.638
Arch_0774
InterPro IPR016566; KEGG: xce:Xcel_1919 hypothetical protein; SPTR: D0WQI0 Putative integral membrane protein; PFAM: Protein of unknown function (DUF3159).
  
     0.622
Arch_0949
KEGG: jde:Jden_1121 hypothetical protein; SPTR: C7R3S0 Putative uncharacterized protein.
  
     0.591
Arch_0719
KEGG: bcv:Bcav_1811 hypothetical protein; SPTR: C0W3W7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3052).
 
     0.590
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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