STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0400ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: xce:Xcel_3322 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D0WP13 Putative ABC transporter, ATP-binding protein. (250 aa)    
Predicted Functional Partners:
Arch_0401
Transcriptional regulator, GntR family; COGs: COG1725 transcriptional regulator protein; InterPro IPR011991:IPR000524; KEGG: kse:Ksed_02920 predicted transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: D0WP12 Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family.
 
     0.952
Arch_0399
Hypothetical protein; KEGG: ttj:TTHA0096 NADH-quinone oxidoreductase chain 13; SPTR: Q72GE0 NADH-quinone oxidoreductase chain M.
       0.782
Arch_1149
Transcriptional regulator, GntR family; COGs: COG1725 transcriptional regulator protein; InterPro IPR000524:IPR011991; KEGG: apr:Apre_0169 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C0W8Y6 GntR family transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family.
 
     0.632
Arch_1523
ABC transporter related protein; COGs: COG4152 ABC-type uncharacterized transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: rop:ROP_50810 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D0WQ28 ABC transporter, ATP-binding protein; PFAM: ABC transporter.
  
     0.471
Arch_1597
MMPL domain protein; COGs: COG2409 drug exporter of the RND superfamily; InterPro IPR000731:IPR004869; KEGG: ach:Achl_3628 MmpL domain protein; PFAM: MMPL domain protein; SPTR: C1RG49 Predicted RND superfamily drug exporter; PFAM: MMPL family.
  
     0.416
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.