STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0404ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: cai:Caci_7925 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D0YQR1 Lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter. (220 aa)    
Predicted Functional Partners:
Arch_0405
Protein of unknown function DUF214; InterPro IPR003838; KEGG: sro:Sros_4389 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: D0YQR0 Putative efflux ABC transporter, permease protein; PFAM: Predicted permease.
 
  
 0.891
Arch_0403
InterPro IPR011991:IPR005149; KEGG: art:Arth_0527 PadR family transcriptional regulator; PFAM: transcriptional regulator PadR family protein; SPTR: C2KN54 PadR family transcriptional regulator; PFAM: Transcriptional regulator PadR-like family.
 
     0.859
Arch_0413
InterPro IPR003838; KEGG: bcv:Bcav_2825 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: C5V906 ABC transporter integral membrane protein; PFAM: Predicted permease.
  
 
 0.702
Arch_0445
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: cmi:CMM_2031 putative ABC transporter, permease component; PFAM: protein of unknown function DUF214; SPTR: C0W202 ABC superfamily ATP binding cassette transporter, permease protein; PFAM: Predicted permease.
 
 
 0.681
Arch_0625
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: jde:Jden_0375 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: D0YSN3 Putative macrolide export ATP-binding/permease protein MacB; PFAM: Predicted permease.
 
 0.678
Arch_0406
COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; InterPro IPR002052; KEGG: pac:PPA0512 putative molybdopterin-guanine dinucleotide biosynthesis protein A; SPTR: C2BVS3 Molybdopterin-guanine dinucleotide biosynthesis protein.
  
    0.635
Arch_0788
Protein of unknown function DUF214; InterPro IPR003838; KEGG: cdl:CDR20291_1803 ABC transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: Q187I6 ABC transporter, permease protein; manually curated; PFAM: Predicted permease.
  
 
 0.559
Arch_0790
Protein of unknown function DUF214; InterPro IPR003838; KEGG: cdl:CDR20291_1805 ABC transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: B6FLT8 Putative uncharacterized protein; PFAM: Predicted permease.
  
 
 0.549
Arch_0443
KEGG: xce:Xcel_2511 hypothetical protein; SPTR: C0W204 Putative uncharacterized protein.
  
 
 0.461
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
   
 0.435
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.