STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0405Protein of unknown function DUF214; InterPro IPR003838; KEGG: sro:Sros_4389 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: D0YQR0 Putative efflux ABC transporter, permease protein; PFAM: Predicted permease. (730 aa)    
Predicted Functional Partners:
Arch_0403
InterPro IPR011991:IPR005149; KEGG: art:Arth_0527 PadR family transcriptional regulator; PFAM: transcriptional regulator PadR family protein; SPTR: C2KN54 PadR family transcriptional regulator; PFAM: Transcriptional regulator PadR-like family.
 
     0.953
Arch_0404
ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: cai:Caci_7925 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D0YQR1 Lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter.
 
  
 0.891
Arch_0064
Peptidase S1 and S6 chymotrypsin/Hap; InterPro IPR001254:IPR009003:IPR001314:IPR018114; KEGG: cdi:DIP0736 putative protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; SPTR: C2BVZ1 Protease; PFAM: Trypsin.
  
     0.699
Arch_0406
COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; InterPro IPR002052; KEGG: pac:PPA0512 putative molybdopterin-guanine dinucleotide biosynthesis protein A; SPTR: C2BVS3 Molybdopterin-guanine dinucleotide biosynthesis protein.
       0.634
Arch_0865
Hypothetical protein; KEGG: tcu:Tcur_2317 transcriptional regulator-like protein; SPTR: D0WMW9 Putative uncharacterized protein.
  
     0.624
Arch_1450
InterPro IPR000387; KEGG: gym:GYMC10_3221 dual specificity protein phosphatase; SPTR: A0JXC1 Dual specificity protein phosphatase; PFAM: Protein-tyrosine phosphatase.
  
     0.593
Arch_1692
KEGG: bln:Blon_1670 hypothetical protein; SPTR: C2BRH1 Putative uncharacterized protein.
  
     0.555
Arch_0065
KEGG: cdi:DIP0737 hypothetical protein; SPTR: C2BVZ2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF418).
  
     0.539
Arch_1440
ABC transporter transmembrane region; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003439:IPR017940:IPR001140:IPR011527:IPR 017871; KEGG: bcv:Bcav_3041 ABC transporter transmembrane region; PFAM: ABC transporter transmembrane region; ABC transporter related; SPTR: D0WKT9 Putative ABC transporter; PFAM: ABC transporter transmembrane region; ABC transporter.
  
     0.517
Arch_1749
Transcriptional regulator, LuxR family; InterPro IPR000792:IPR016032:IPR011991; KEGG: sco:SCO1353 transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: Q7WWP4 Putative transcriptional regulator; PFAM: Bacterial regulatory proteins, luxR family.
  
     0.508
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.