STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0423KEGG: cdi:DIP0114 hypothetical protein; SPTR: Q6NKB9 Putative membrane protein; PFAM: Protein of unknown function (DUF2871). (146 aa)    
Predicted Functional Partners:
Arch_1641
DSBA oxidoreductase; InterPro IPR012336:IPR001853:IPR012335; KEGG: xce:Xcel_2947 DsbA oxidoreductase; PFAM: DSBA oxidoreductase; SPTR: D0WJV3 Putative uncharacterized protein; PFAM: DSBA-like thioredoxin domain.
  
 
 0.614
Arch_1790
DSBA oxidoreductase; COGs: COG1651 Protein-disulfide isomerase; InterPro IPR012336:IPR017936:IPR001853:IPR012335; KEGG: cgt:cgR_0023 hypothetical protein; PFAM: DSBA oxidoreductase; SPTR: A4Q9U1 Putative uncharacterized protein; PFAM: DSBA-like thioredoxin domain.
  
 
 0.614
Arch_1179
COGs: COG0516 IMP dehydrogenase/GMP reductase; InterProIPR005991:IPR018529:IPR000644:IPR013785:IPR 001093; KEGG: sco:SCO1461 inosine 5-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; PRIAM: IMP dehydrogenase; SMART: CBS domain containing protein; SPTR: C0W4C2 Possible IMP dehydrogenase; TIGRFAM: IMP dehydrogenase family protein; PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; IMP dehydrogenase family protein.
  
 
 0.554
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.