STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0443KEGG: xce:Xcel_2511 hypothetical protein; SPTR: C0W204 Putative uncharacterized protein. (340 aa)    
Predicted Functional Partners:
Arch_0445
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: cmi:CMM_2031 putative ABC transporter, permease component; PFAM: protein of unknown function DUF214; SPTR: C0W202 ABC superfamily ATP binding cassette transporter, permease protein; PFAM: Predicted permease.
 
 
 0.993
Arch_0444
ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: xce:Xcel_2510 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A7BA83 Putative uncharacterized protein; PFAM: ABC transporter.
 
 
 0.933
Arch_0244
PKD domain containing protein; InterProIPR000601:IPR001087:IPR013831:IPR002035:IPR 013830; KEGG: pac:PPA1665 hypothetical protein; PFAM: PKD domain containing protein; lipolytic protein G-D-S-L family; SMART: PKD domain containing protein; SPTR: C0VY99 Putative uncharacterized protein; PFAM: GDSL-like Lipase/Acylhydrolase; PKD domain.
 
    0.670
Arch_1624
COGs: COG1842 Phage shock protein A (IM30) suppresses sigma54-dependent transcription; InterPro IPR007157; KEGG: xce:Xcel_2934 phage shock protein A, PspA; PFAM: PspA/IM30 family protein; SPTR: D0WJT6 PspA/IM30 family protein; PFAM: PspA/IM30 family.
  
    0.529
Arch_0128
Endonuclease/exonuclease/phosphatase; COGs: COG3021 conserved hypothetical protein; InterPro IPR005135; KEGG: bcv:Bcav_0233 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: C5BVQ8 Endonuclease/exonuclease/phosphatase.
  
     0.525
Arch_1623
Chromogranin/secretogranin; InterPro IPR001990; KEGG: xce:Xcel_2933 hypothetical protein; PFAM: Chromogranin/secretogranin; SPTR: D0WJT5 Putative secreted protein.
 
     0.493
Arch_1224
KEGG: xce:Xcel_1029 TadE family protein; SPTR: A1R814 Putative TadE-like family protein.
  
     0.476
Arch_0961
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterProIPR010066:IPR003439:IPR000515:IPR017871:IPR 003593:IPR013563; KEGG: ele:Elen_2148 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; binding-protein-dependent transport systems inner membrane component; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: A7BBZ1 Putative uncharacterized protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC trans [...]
 
   
 0.464
Arch_0404
ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: cai:Caci_7925 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D0YQR1 Lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter.
  
 
 0.461
Arch_0414
ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439; KEGG: blt:Balat_1147 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SPTR: C6AJB3 Putative ABC transporter ATP-binding protein; PFAM: ABC transporter.
  
 
 0.461
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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