STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0450Hypothetical protein; KEGG: bcv:Bcav_2644 ATP-binding membrane protein; SPTR: D0WRE5 Putative ATP-binding membrane protein; PFAM: Elongation factor Tu GTP binding domain. (488 aa)    
Predicted Functional Partners:
Arch_0449
KEGG: bcv:Bcav_2645 putative transcriptional regulator, TetR family; SPTR: D0WRE6 Putative ATP/GTP-binding protein; PFAM: Dynamin family.
 
    
0.790
Arch_0767
KEGG: nca:Noca_2946 hypothetical protein; SPTR: D0WQI8 Putative uncharacterized protein.
  
     0.703
Arch_0817
KEGG: xce:Xcel_1661 hypothetical protein; SPTR: D0WQG1 Putative uncharacterized protein.
 
     0.700
rpsI
COGs: COG0103 Ribosomal protein S9; InterPro IPR000754:IPR014721:IPR020568:IPR020574; KEGG: xce:Xcel_0662 ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: A7B9L2 30S ribosomal protein S9; PFAM: Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family.
 
 0.649
Arch_0451
Single-strand binding protein; InterPro IPR012340:IPR000424:IPR011344:IPR016027; KEGG: ach:Achl_2173 single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: D0WRE4 Single-stranded DNA-binding protein 1; TIGRFAM: single-strand binding protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb).
 
   0.618
Arch_0224
Domain of unknown function DUF1794; May play a role in the intracellular transport of hydrophobic ligands; Belongs to the UPF0678 family.
 
    0.610
rpsG
Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
    
 0.601
rpsP
COGs: COG0228 Ribosomal protein S16; InterPro IPR000307:IPR020592; KEGG: bad:BAD_0209 30S ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: A0ZZV7 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
    
 0.593
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
   
  0.585
Arch_0864
COGs: COG2378 transcriptional regulator protein; KEGG: kse:Ksed_13990 predicted transcriptional regulator; SPTR: D0WMX0 Putative uncharacterized protein.
  
     0.581
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.