STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0453KEGG: cbt:CLH_0659 putative lipoprotein; SPTR: C0VY11 Putative uncharacterized protein. (548 aa)    
Predicted Functional Partners:
Arch_0071
COGs: COG1216 glycosyltransferase; InterPro IPR001173:IPR001296; KEGG: nml:Namu_4203 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; glycosyl transferase group 1; SPTR: C1RIN5 Predicted glycosyltransferase (Fragment); PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.
   
 
 0.581
Arch_0084
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ape:APE_2066.1 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: C0W8F1 N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein; PFAM: Glycosyl transferases group 1.
   
 
 0.576
Arch_0816
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: xce:Xcel_1660 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: D0WQG2 Phosphatidylinositol alpha-mannosyltransferase; PFAM: Glycosyl transferases group 1.
   
 
 0.576
Arch_0927
Glycogen synthase; COGs: COG0438 Glycosyltransferase; InterPro IPR019793:IPR011875:IPR001296; KEGG: bcv:Bcav_2317 glycogen synthase; PFAM: glycosyl transferase group 1; SPTR: D0WML0 Glycogen synthase; TIGRFAM: glycogen synthase; PFAM: Glycosyl transferases group 1; TIGRFAM: glycogen synthase, Corynebacterium family.
   
 
 0.576
Arch_1096
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sco:SCO2132 glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: D0WNF3 Glycosyl transferase; PFAM: Glycosyl transferases group 1.
   
 
 0.576
Arch_0452
COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR017871:IPR003439:IPR003593; KEGG: mlu:Mlut_09750 ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D0WRE3 ABC transporter, ATP-binding protein; PFAM: ABC transporter.
  
  
 0.502
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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