STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0487Protein of unknown function DUF466; InterPro IPR007423; KEGG: mlu:Mlut_08620 uncharacterized small protein; PFAM: protein of unknown function DUF466; SPTR: D0WP82 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF466). (66 aa)    
Predicted Functional Partners:
Arch_0486
COGs: COG1966 Carbon starvation protein predicted membrane protein; InterPro IPR003706; KEGG: krh:KRH_18870 carbon starvation protein; PFAM: carbon starvation protein CstA; SPTR: D0WP83 Carbon starvation protein A; PFAM: Carbon starvation protein CstA.
 
  
 0.960
Arch_0535
KEGG: nml:Namu_3858 cobalamin synthesis CobW domain protein; SPTR: D1BFN4 Predicted GTPase, G3E family; PFAM: Cobalamin synthesis protein cobW C-terminal domain.
 
  
 0.487
Arch_1312
KEGG: cjk:jk0699 hypothetical protein; SPTR: Q4JWE6 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF955).
  
     0.476
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.