STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0499KEGG: rlt:Rleg2_1061 hypothetical protein; SPTR: D0YT67 AAA ATPase. (79 aa)    
Predicted Functional Partners:
Arch_0498
AAA ATPase; KEGG: mjl:Mjls_0867 AAA ATPase; SPTR: Q1BDQ7 ATPas.
       0.623
Arch_0497
Glycoside hydrolase family 29 (alpha-L-fucosidase); COGs: COG3669 Alpha-L-fucosidase; InterPro IPR013781:IPR000933:IPR017853:IPR016286; KEGG: pac:PPA0607 glycosyl hydrolase, putative alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); SMART: glycoside hydrolase family 29 (alpha-L-fucosidase); SPTR: Q6AA53 Glycosyl hydrolase, putative alpha-L-fucosidase; PFAM: Alpha-L-fucosidase.
       0.571
Arch_0495
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: lxx:Lxx23450 ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A7B9K3 Putative uncharacterized protein; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.552
Arch_0496
Binding-protein-dependent transport systems inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: pac:PPA0606 putative transport system permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q6AA54 Putative transport system permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.552
Arch_0494
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: pac:PPA0604 putative sugar binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: A7B9K4 Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding protein.
       0.418
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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