STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0519DNA methylase N-4/N-6 domain protein; COGs: COG0863 DNA modification methylase; InterProIPR002052:IPR002295:IPR003115:IPR002941:IPR 015840; KEGG: pac:PPA1586 ParB family DNA methylase; PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: C2KNX9 ParB family DNA methylase; manually curated; PFAM: ParB-like nuclease domain; DNA methylase. (416 aa)    
Predicted Functional Partners:
Arch_0516
KEGG: pac:PPA1589 hypothetical protein; SPTR: C2KNY1 Putative uncharacterized protein; PFAM: Phage terminase, small subunit.
 
    0.929
Arch_0521
Terminase; COGs: COG4626 Phage terminase-like protein large subunit; InterPro IPR005021; KEGG: cce:Ccel_2837 terminase; PFAM: Terminase; SPTR: C2KNX4 Phage terminase; PFAM: Phage Terminase.
 
     0.866
Arch_1566
KEGG: pac:PPA1585 phage-associated protein; SPTR: C8RU49 Virulence-related protein.
 
  
 0.862
Arch_1043
KEGG: pac:PPA1589 hypothetical protein; SPTR: C2KNY1 Putative uncharacterized protein.
 
    0.848
Arch_0517
COGs: COG0192 S-adenosylmethionine synthetase; InterPro IPR001412:IPR002133; KEGG: pac:PPA1587 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; PRIAM: Methionine adenosyltransferase; SPTR: C2KNY0 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase.
       0.847
Arch_1548
COGs: COG4653 phage phi-C31 gp36 major capsid-like protein; InterPro IPR006444; KEGG: tex:Teth514_1254 HK97 family phage major capsid protein; PFAM: major capsid protein HK97; SPTR: C8RU58 HK97 family major capsid protein; TIGRFAM: phage major capsid protein, HK97 family; PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family.
 
    0.840
Arch_0457
HNH endonuclease; InterPro IPR002711:IPR003615; KEGG: cdi:DIP2153 putative bacteriophage holin protein; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: C2KNY6 Possible bacteriophage endonuclease; PFAM: HNH endonuclease.
 
  
 0.831
Arch_0512
HNH endonuclease; InterPro IPR002711:IPR003615; KEGG: cdi:DIP2153 putative bacteriophage holin protein; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: C2KNY6 Possible bacteriophage endonuclease; PFAM: HNH endonuclease.
 
  
 0.821
Arch_1550
Phage portal protein, HK97 family; COGs: COG4695 Phage-related protein; InterPro IPR006944:IPR006427; KEGG: det:DET1087 HK97 family portal protein, putative; PFAM: portal protein; SPTR: C2KNX2 HK97 family portal protein; TIGRFAM: phage portal protein, HK97 family; PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.
 
  
 0.821
Arch_0523
Portal protein; COGs: COG4695 Phage-related protein; InterPro IPR006944; KEGG: tex:Teth514_1252 HK97 family phage portal protein; PFAM: portal protein; SPTR: C2KNX2 HK97 family portal protein; PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.
 
  
 0.815
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.