STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0531ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: kse:Ksed_07200 ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D0WNH4 Lipoprotein releasing system, ATP-binding protein LolD; PFAM: ABC transporter. (234 aa)    
Predicted Functional Partners:
Arch_0532
Protein of unknown function DUF214; InterPro IPR003838; KEGG: kse:Ksed_07190 predicted permease; PFAM: protein of unknown function DUF214; SPTR: D0WNH5 Putative permease domain protein; PFAM: Predicted permease.
 
  
 0.927
Arch_0413
InterPro IPR003838; KEGG: bcv:Bcav_2825 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: C5V906 ABC transporter integral membrane protein; PFAM: Predicted permease.
  
 
 0.732
Arch_0625
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: jde:Jden_0375 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: D0YSN3 Putative macrolide export ATP-binding/permease protein MacB; PFAM: Predicted permease.
 
 0.730
Arch_0445
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: cmi:CMM_2031 putative ABC transporter, permease component; PFAM: protein of unknown function DUF214; SPTR: C0W202 ABC superfamily ATP binding cassette transporter, permease protein; PFAM: Predicted permease.
 
 
 0.716
Arch_0788
Protein of unknown function DUF214; InterPro IPR003838; KEGG: cdl:CDR20291_1803 ABC transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: Q187I6 ABC transporter, permease protein; manually curated; PFAM: Predicted permease.
  
 
 0.633
Arch_0443
KEGG: xce:Xcel_2511 hypothetical protein; SPTR: C0W204 Putative uncharacterized protein.
  
 
 0.593
Arch_0790
Protein of unknown function DUF214; InterPro IPR003838; KEGG: cdl:CDR20291_1805 ABC transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: B6FLT8 Putative uncharacterized protein; PFAM: Predicted permease.
  
 
 0.585
Arch_1509
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: cef:CE2584 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D0WQ04 Bacitracin transport ATP-binding protein BcrA; PFAM: ABC transporter.
  
0.558
Arch_1486
ABC transporter ATP-binding protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; KEGG: rsa:RSal33209_0879 ABC transporter ATP-binding protein; SPTR: A9WQH2 ABC transporter ATP-binding protein; PFAM: Adenovirus IVa2 protein.
 
  
 0.542
cysS
COGs: COG0215 Cysteinyl-tRNA synthetase; InterProIPR009080:IPR015803:IPR015273:IPR002308:IPR 014729; KEGG: bcv:Bcav_0780 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; PRIAM: Cysteine--tRNA ligase; SPTR: D0WJY3 Cysteine--tRNA ligase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.487
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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