STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0545Major facilitator superfamily MFS_1; COGs: COG2271 Sugar phosphate permease; InterPro IPR011701:IPR016196; KEGG: esi:Exig_2601 sugar phosphate antiporter; PFAM: major facilitator superfamily MFS_1; SPTR: A7BCA4 Putative uncharacterized protein; PFAM: Major Facilitator Superfamily. (466 aa)    
Predicted Functional Partners:
Arch_0546
Inositol monophosphatase; COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR000760; KEGG: lin:lin1054 hypothetical protein; PFAM: inositol monophosphatase; SPTR: A7BCA5 Putative uncharacterized protein; PFAM: Inositol monophosphatase family.
 
     0.739
Arch_0544
Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR013838:IPR000843:IPR001761:IPR010982; KEGG: rop:ROP_52910 putative LacI family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: A7BCA6 Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, lacI family; family.
       0.441
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.