STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0585COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014729:IPR014730:IPR012255; KEGG: pac:PPA2214 putative electron transfer flavoprotein (FixA protein); PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: D0WNZ9 Putative electron transfer flavoprotein; PFAM: Electron transfer flavoprotein domain. (253 aa)    
Predicted Functional Partners:
Arch_0586
COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730:IPR014731:IPR001308; KEGG: pac:PPA2213 putative electron transfer flavoprotein, carnitine metabolism (FixB protein); PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SPTR: D0WNZ8 Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
 
 0.998
Arch_1355
COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR001308:IPR014731; KEGG: pac:PPA2213 putative electron transfer flavoprotein, carnitine metabolism (FixB protein); PFAM: Electron transfer flavoprotein alpha subunit; SPTR: D0WNZ8 Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
 
 0.992
Arch_0588
COGs: COG2440 Ferredoxin-like protein; InterPro IPR017896:IPR012206; KEGG: pth:PTH_1765 ferredoxin-like protein; SPTR: A7B9C8 Putative uncharacterized protein.
 
 0.985
Arch_1363
COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006092:IPR006091:IPR006090:IPR013786:IPR 013764:IPR009100:IPR009075; KEGG: drm:Dred_0570 crotonobetainyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: D0WP06 Crotonobetainyl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
 
 
 0.981
Arch_1353
Conserved hypothetical protein; COGs: COG2440 Ferredoxin-like protein; InterPro IPR012206:IPR017896; KEGG: dsy:DSY3795 hypothetical protein; SPTR: D0WNZ6 Ferredoxin.
 
 0.954
Arch_0587
Electron-transferring-flavoproteindehydrogenase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR003042:IPR006076; KEGG: pac:PPA2212 putative electron transfer flavoprotein-quinone oxidoreductase (FixC protein); PFAM: FAD dependent oxidoreductase; PRIAM: Electron-transferring-flavoprotein dehydrogenase; SPTR: D0WNZ7 FixC protein; PFAM: FAD dependent oxidoreductase.
 
 
 0.943
Arch_1354
Electron-transferring-flavoproteindehydrogenase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR006076:IPR003042; KEGG: pac:PPA2212 putative electron transfer flavoprotein-quinone oxidoreductase (FixC protein); PFAM: FAD dependent oxidoreductase; PRIAM: Electron-transferring-flavoprotein dehydrogenase; SPTR: D0WNZ7 FixC protein; PFAM: FAD dependent oxidoreductase.
 
 
 0.787
Arch_1362
L-carnitine dehydratase/bile acid-inducible protein F; COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: ele:Elen_1833 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: D0WP05 Crotonobetainyl-CoA:carnitine CoA-transferase; PFAM: CoA-transferase family III.
 
 
 
 0.686
Arch_1414
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027:IPR000759; KEGG: bcv:Bcav_3195 ferredoxin--NADP(+) reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: D0WPH0 Ferredoxin--NADP reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.653
nuoI
NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.557
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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