STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0604DivIVA domain repeat protein; InterPro IPR019932:IPR019933; KEGG: bcv:Bcav_2501 hypothetical protein; SPTR: D0WR37 DivIVA domain repeat protein; TIGRFAM: DivIVA domain repeat protein; DivIVA domain; TIGRFAM: DivIVA domain; DivIVA domain repeat protein. (183 aa)    
Predicted Functional Partners:
rlmN
Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
       0.807
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
       0.807
Arch_0606
Peptidase M50; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR008915:IPR001478; KEGG: bcv:Bcav_2499 peptidase M50; PFAM: peptidase M50; SPTR: D0WR35 Zinc metalloprotease; PFAM: Peptidase family M50; TIGRFAM: RIP metalloprotease RseP.
 
     0.802
Arch_0189
Hypothetical protein; KEGG: bcv:Bcav_3646 orotate phosphoribosyltransferase; SPTR: C0VYD8 Orotate phosphoribosyltransferase.
  
     0.748
Arch_1632
KEGG: bcv:Bcav_0815 hypothetical protein; SPTR: D0WJU8 Putative uncharacterized protein.
  
     0.748
Arch_1614
KEGG: bcv:Bcav_0899 DNA helicase; SPTR: D0WJR7 Putative uncharacterized protein.
  
     0.747
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
  
     0.731
Arch_0375
KEGG: bcv:Bcav_1332 hypothetical protein; SPTR: D0WRU7 Putative uncharacterized protein.
 
     0.712
Arch_0602
Phosphatidate cytidylyltransferase; COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: xce:Xcel_1184 phosphatidate cytidylyltransferase; PFAM: phosphatidate cytidylyltransferase; SPTR: D0WR40 Phosphatidate cytidylyltransferase; PFAM: Cytidylyltransferase family; Belongs to the CDS family.
       0.698
Arch_0681
DivIVA domain protein; InterPro IPR019933:IPR007793; KEGG: xce:Xcel_1291 DivIVA family protein; PFAM: DivIVA family protein; SPTR: D0WQV0 Cell division protein, DivIVA family; TIGRFAM: DivIVA domain; PFAM: DivIVA protein; TIGRFAM: DivIVA domain.
  
     0.698
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.