STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0623Peptidoglycan-binding domain 1 protein; InterPro IPR002477; KEGG: jde:Jden_0373 hypothetical protein; PFAM: Peptidoglycan-binding domain 1 protein; SPTR: C7QZN6 Putative uncharacterized protein; PFAM: Putative peptidoglycan binding domain. (398 aa)    
Predicted Functional Partners:
Arch_0625
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: jde:Jden_0375 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: D0YSN3 Putative macrolide export ATP-binding/permease protein MacB; PFAM: Predicted permease.
 
     0.935
Arch_0624
ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: jde:Jden_0374 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C2KQ56 ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter.
 
    0.839
Arch_0622
KEGG: jde:Jden_0372 hypothetical protein; SPTR: D0YSN0 Putative lipoprotein.
       0.633
Arch_0621
KEGG: xce:Xcel_0812 hypothetical protein; SPTR: C2KQ49 Putative uncharacterized protein.
       0.542
Arch_0152
Multisubunit sodium/proton antiporter, MrpF subunit; InterPro IPR007208; KEGG: xce:Xcel_3183 multiple resistance and pH regulation protein F; PFAM: multiple resistance and pH regulation protein F; SPTR: D1C0I0 Multiple resistance and pH regulation protein F; PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF); 2.A.63.1.
 
     0.502
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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