STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0713KEGG: bcv:Bcav_1809 hypothetical protein; SPTR: C5C4T7 Putative uncharacterized protein. (200 aa)    
Predicted Functional Partners:
Arch_0255
KEGG: xce:Xcel_2983 hypothetical protein; SPTR: D1BZ92 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3180).
  
     0.765
Arch_1223
KEGG: xce:Xcel_1028 TadE family protein; SPTR: D1BYY4 TadE family protein.
  
     0.764
Arch_0318
KEGG: bcv:Bcav_1260 hypothetical protein; SPTR: C5C1Q2 Putative uncharacterized protein.
  
     0.757
Arch_0223
KEGG: bcv:Bcav_3418 hypothetical protein; SPTR: C5C235 Putative uncharacterized protein.
  
     0.747
Arch_0374
KEGG: bcv:Bcav_1331 hypothetical protein; SPTR: D0WRU5 Putative uncharacterized protein (Fragment).
  
     0.745
Arch_1809
Hypothetical protein; InterPro IPR011009; KEGG: xce:Xcel_3367 hypothetical protein; SPTR: D1BRV0 Putative uncharacterized protein.
  
     0.734
Arch_1068
InterPro IPR011251; KEGG: bcv:Bcav_1628 hypothetical protein; SPTR: D0WNB4 Nitrilotriacetate monooxygenase.
  
     0.733
Arch_1654
KEGG: bcv:Bcav_0533 hypothetical protein; SPTR: D0WJX6 Cell envelope-related transcriptional attenuator.
  
     0.708
Arch_1808
KEGG: bcv:Bcav_4209 hypothetical protein; SPTR: D0WL37 Putative uncharacterized protein.
  
     0.707
Arch_0714
Sua5/YciO/YrdC/YwlC family protein; COGs: COG0009 Putative translation factor (SUA5); InterPro IPR017945:IPR006070:IPR004388; KEGG: bfa:Bfae_12460 translation factor SUA5; PFAM: SUA5/yciO/yrdC domain; SPTR: D0WQR0 Sua5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; Belongs to the SUA5 family.
       0.701
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.