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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0714Sua5/YciO/YrdC/YwlC family protein; COGs: COG0009 Putative translation factor (SUA5); InterPro IPR017945:IPR006070:IPR004388; KEGG: bfa:Bfae_12460 translation factor SUA5; PFAM: SUA5/yciO/yrdC domain; SPTR: D0WQR0 Sua5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; Belongs to the SUA5 family. (208 aa)    
Predicted Functional Partners:
Arch_0715
Haloacid dehalogenase domain protein hydrolase; COGs: COG0546 phosphatase; InterPro IPR005834; KEGG: rer:RER_36620 hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: D0WQQ9 Phosphatase, HAD family; PFAM: haloacid dehalogenase-like hydrolase.
  
    0.777
Arch_0713
KEGG: bcv:Bcav_1809 hypothetical protein; SPTR: C5C4T7 Putative uncharacterized protein.
       0.701
tsaD
Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
 
 0.656
Arch_1334
Peptidase M22 glycoprotease; COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone; InterPro IPR000905; KEGG: xce:Xcel_0675 peptidase M22 glycoprotease; PFAM: peptidase M22 glycoprotease; SPTR: D0WP53 Universal bacterial protein YeaZ; PFAM: Glycoprotease family.
    
 0.587
Arch_1336
Protein of unknown function UPF0079; COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: xce:Xcel_0674 protein of unknown function UPF0079; PFAM: protein of unknown function UPF0079; SPTR: D0WP55 ATP/GTP hydrolase; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: conserved hypothetical nucleotide-binding protein.
    
 0.575
Arch_0712
KEGG: asa:ASA_0911 acyl carrier protein; SPTR: A4SJH3 Acyl carrier protein.
       0.490
Arch_1236
PHP domain protein; COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR016195:IPR003141:IPR004013; KEGG: jde:Jden_0704 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: D0WNN5 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: PHP domain.
 
    0.488
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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