STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0719KEGG: bcv:Bcav_1811 hypothetical protein; SPTR: C0W3W7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3052). (137 aa)    
Predicted Functional Partners:
Arch_0608
GCN5-related N-acetyltransferase; COGs: COG3393 acetyltransferase; InterPro IPR016181:IPR000182; KEGG: bcv:Bcav_2497 GCN5-related protein N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: D0WR27 Acetyltransferase, GNAT family protein; PFAM: Acetyltransferase (GNAT) family.
  
     0.759
Arch_1095
Transcriptional regulator, IclR family; COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: xce:Xcel_2358 transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; SPTR: D1BVQ5 Transcriptional regulator, IclR family; manually curated; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator.
  
     0.718
Arch_0771
KEGG: bcv:Bcav_1935 hypothetical protein; SPTR: D0WQI4 Putative uncharacterized protein.
  
     0.712
Arch_0904
InterPro IPR004989:IPR004347; KEGG: bcv:Bcav_2240 protein of unknown function DUF245 domain protein; PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; SPTR: D0WMP2 Proteasome accessory factor PafA2; PFAM: Pup-ligase protein.
  
     0.650
Arch_0902
InterPro IPR004989:IPR004347; KEGG: xce:Xcel_1490 protein of unknown function DUF245 domain protein; PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; SPTR: D0WMP4 Proteasome accessory factor PafA; PFAM: Pup-ligase protein.
  
     0.637
Arch_0007
KEGG: kra:Krad_0008 hypothetical protein; SPTR: D0WL02 Putative integral membrane protein; PFAM: Transmembrane domain of unknown function (DUF3566).
  
     0.632
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.620
Arch_1714
KEGG: bcv:Bcav_0621 type II secretion system protein; SPTR: D0WK41 Putative integral membrane protein.
  
     0.605
Arch_0938
COGs: COG2345 transcriptional regulator protein; InterPro IPR001845; KEGG: jde:Jden_1139 putative transcriptional regulator; PFAM: regulatory protein ArsR; SPTR: D0WMJ3 Putative DNA-binding transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
  
     0.601
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
  
     0.575
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.