STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0740COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: cdi:DIP0583 putative iron transport system membrane protein; PFAM: transport system permease protein; SPTR: Q6NJ30 Putative iron transport system membrane protein; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (339 aa)    
Predicted Functional Partners:
Arch_0738
ABC transporter related protein; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR017871:IPR003593:IPR003439; KEGG: cdi:DIP0585 putative iron transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q6NJ28 Putative iron transport system ATP-binding protein; PFAM: ABC transporter.
 
 
 0.982
Arch_0631
ABC transporter related protein; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR017871:IPR003439:IPR003593; KEGG: pac:PPA0782 ABC-type transporter, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0W1M7 ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter.
 
 
 0.923
Arch_0741
Periplasmic binding protein; COGs: COG4594 ABC-type Fe3+-citrate transport system periplasmic component; InterPro IPR002491; KEGG: cdi:DIP0582 putative iron transport system binding (secreted) protein; PFAM: periplasmic binding protein; SPTR: Q6NJ31 Putative iron transport system binding (Secreted) protein; PFAM: Periplasmic binding protein.
 
  
 0.918
Arch_0739
COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: cdi:DIP0584 putative iron transport system membrane protein; PFAM: transport system permease protein; SPTR: Q6NJ29 Putative iron transport system membrane protein; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   
0.848
Arch_0629
Periplasmic binding protein; COGs: COG4558 ABC-type hemin transport system periplasmic component; InterPro IPR002491; KEGG: pac:PPA0780 hemin receptor precursor; PFAM: periplasmic binding protein; SPTR: C0W1M5 HmuT family heme-binding lipoprotein; PFAM: Periplasmic binding protein.
 
 
 0.735
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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