STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0741Periplasmic binding protein; COGs: COG4594 ABC-type Fe3+-citrate transport system periplasmic component; InterPro IPR002491; KEGG: cdi:DIP0582 putative iron transport system binding (secreted) protein; PFAM: periplasmic binding protein; SPTR: Q6NJ31 Putative iron transport system binding (Secreted) protein; PFAM: Periplasmic binding protein. (313 aa)    
Predicted Functional Partners:
Arch_0738
ABC transporter related protein; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR017871:IPR003593:IPR003439; KEGG: cdi:DIP0585 putative iron transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q6NJ28 Putative iron transport system ATP-binding protein; PFAM: ABC transporter.
 
  
 0.950
Arch_0739
COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: cdi:DIP0584 putative iron transport system membrane protein; PFAM: transport system permease protein; SPTR: Q6NJ29 Putative iron transport system membrane protein; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.920
Arch_0740
COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: cdi:DIP0583 putative iron transport system membrane protein; PFAM: transport system permease protein; SPTR: Q6NJ30 Putative iron transport system membrane protein; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.900
Arch_1089
COGs: COG4606 ABC-type enterochelin transport system permease component; InterPro IPR000522; KEGG: bfa:Bfae_30530 ABC-type enterochelin transport system, permease component; PFAM: transport system permease protein; SPTR: C7MAS7 ABC-type enterochelin transport system, permease component; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
    0.672
Arch_1087
ABC transporter related protein; COGs: COG4604 ABC-type enterochelin transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: mlu:Mlut_16570 ABC-type enterochelin transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C5CC04 ABC-type enterochelin transport system, ATPase component; PFAM: ABC transporter.
  
  
 0.591
Arch_0631
ABC transporter related protein; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR017871:IPR003439:IPR003593; KEGG: pac:PPA0782 ABC-type transporter, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0W1M7 ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter.
  
  
 0.529
Arch_0982
KEGG: hypothetical protein; SPTR: C1FFK9 Predicted protein.
  
     0.525
Arch_1090
Periplasmic binding protein; COGs: COG4607 ABC-type enterochelin transport system periplasmic component; InterPro IPR002491; KEGG: mlu:Mlut_16600 ABC-type enterochelin transport system, periplasmic component; PFAM: periplasmic binding protein; SPTR: C5CC07 ABC-type enterochelin transport system, periplasmic component; PFAM: Periplasmic binding protein.
  
  
 0.487
Arch_1646
COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR003593:IPR008921:IPR003959:IPR012763; KEGG: rsa:RSal33209_3356 DNA polymerase III subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: A7BAA1 Putative uncharacterized protein; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunits gamma and tau.
    
   0.483
Arch_1735
Integrin alpha beta-propellor repeat protein; InterPro IPR013519; KEGG: ITGA1; integrin, alpha 1; K06480 integrin alpha 1; SMART: Integrin alpha beta-propellor repeat protein; SPTR: C2KTJ5 FG-GAP repeat domain protein.
  
     0.479
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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