STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0756KEGG: bcv:Bcav_1909 hypothetical protein; SPTR: D0WQK7 Putative transcriptional regulatory protein. (120 aa)    
Predicted Functional Partners:
Arch_0755
Lytic transglycosylase catalytic; InterPro IPR002482:IPR018392:IPR008258; KEGG: rsa:RSal33209_2511 putative endopeptidase LytE precursor; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: D0WQK8 Putative LysM domain protein; PFAM: Transglycosylase SLT domain; LysM domain.
 
     0.716
Arch_0743
KEGG: bcv:Bcav_1880 putative integral membrane protein; SPTR: D0WQM3 Putative membrane protein; PFAM: Protein of unknown function (DUF3043).
  
     0.691
Arch_1417
Lipoprotein LpqB, GerMN domain protein; InterPro IPR019606:IPR018910; KEGG: bcv:Bcav_1242 lipoprotein LpqB; PFAM: Lipoprotein LpqB, GerMN domain; Lipoprotein LpqB, beta-propeller domain-like; SPTR: D0WPH3 Putative lipoprotein LpqB; PFAM: Lipoprotein LpqB beta-propeller domain; Sporulation and spore germination.
  
     0.656
Arch_0681
DivIVA domain protein; InterPro IPR019933:IPR007793; KEGG: xce:Xcel_1291 DivIVA family protein; PFAM: DivIVA family protein; SPTR: D0WQV0 Cell division protein, DivIVA family; TIGRFAM: DivIVA domain; PFAM: DivIVA protein; TIGRFAM: DivIVA domain.
  
     0.652
Arch_0817
KEGG: xce:Xcel_1661 hypothetical protein; SPTR: D0WQG1 Putative uncharacterized protein.
  
     0.618
Arch_0667
KEGG: krh:KRH_14890 hypothetical protein; SPTR: D0WQW4 Putative membrane protein.
  
     0.605
Arch_0664
KEGG: krh:KRH_14920 hypothetical protein; SPTR: D0WQW9 Membrane protein; PFAM: Protein of unknown function (DUF3040).
  
     0.596
Arch_0146
Iron (metal) dependent repressor, DtxR family; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367:IPR007167:IPR011991:IPR008988; KEGG: bfa:Bfae_31300 Mn-dependent transcriptional regulator; PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor; SPTR: C7MB03 Mn-dependent transcriptional regulator; PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain.
   
    0.594
Arch_0754
Serine/threonine protein kinase with PASTA sensor(s); COGs: COG2815 conserved hypothetical protein; InterProIPR011009:IPR008271:IPR020635:IPR002290:IPR 005543:IPR000719:IPR017442; KEGG: bcv:Bcav_1908 serine/threonine protein kinase with PASTA sensor(s); PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; PASTA domain containing protein; SPTR: A7BDG0 Putative uncharacterized protein; PFAM: Protein kinase domain; PASTA domain.
     
 0.554
Arch_1229
COGs: COG3173 aminoglycoside phosphotransferase; InterPro IPR011009:IPR002575; KEGG: bcv:Bcav_2900 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: D0WNM2 Putative phosphotransferase; PFAM: Phosphotransferase enzyme family.
  
     0.543
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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