STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0768Type I phosphodiesterase/nucleotide pyrophosphatase; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR017850:IPR017849:IPR002591; KEGG: bcv:Bcav_1931 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: D0WQI7 Type I phosphodiesterase / nucleotide pyrophosphatase family protein; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase. (372 aa)    
Predicted Functional Partners:
Arch_0767
KEGG: nca:Noca_2946 hypothetical protein; SPTR: D0WQI8 Putative uncharacterized protein.
 
     0.869
Arch_0769
COGs: COG1435 Thymidine kinase; InterPro IPR001267; KEGG: bcv:Bcav_1932 thymidine kinase; PFAM: thymidine kinase; PRIAM: Thymidine kinase; SPTR: D0WQI6 Thymidine kinase; PFAM: Thymidine kinase.
       0.838
Arch_0766
COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterProIPR013760:IPR002205:IPR013758:IPR013757:IPR 006691; KEGG: bcv:Bcav_1928 DNA topoisomerase (ATP-hydrolyzing); PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: C5C5J3 DNA topoisomerase (ATP-hydrolyzing); PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller.
       0.613
Arch_1118
KEGG: bcv:Bcav_2744 hypothetical protein; SPTR: D0WNJ1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3039).
  
     0.560
Arch_0733
KEGG: mlu:Mlut_13380 hypothetical protein; SPTR: D0WQN5 Integral membrane protein.
  
     0.484
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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