STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0772KEGG: tfu:Tfu_1934 hypothetical protein; SPTR: D0WQI3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3710). (202 aa)    
Predicted Functional Partners:
Arch_0771
KEGG: bcv:Bcav_1935 hypothetical protein; SPTR: D0WQI4 Putative uncharacterized protein.
 
     0.918
Arch_0774
InterPro IPR016566; KEGG: xce:Xcel_1919 hypothetical protein; SPTR: D0WQI0 Putative integral membrane protein; PFAM: Protein of unknown function (DUF3159).
 
     0.880
Arch_0773
Hypothetical protein; KEGG: ace:Acel_1194 nucleic acid binding, OB-fold, tRNA/helicase-type; SPTR: D0WQI2 Putative nucleic acid binding, OB-fold, tRNA/helicase-type.
       0.800
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.735
Arch_0733
KEGG: mlu:Mlut_13380 hypothetical protein; SPTR: D0WQN5 Integral membrane protein.
  
     0.657
Arch_0830
InterPro IPR007139; KEGG: bcv:Bcav_2001 protein of unknown function DUF349; PFAM: protein of unknown function DUF349; SPTR: C5C5R5 Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF349).
  
     0.655
Arch_1118
KEGG: bcv:Bcav_2744 hypothetical protein; SPTR: D0WNJ1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3039).
  
     0.655
Arch_0869
InterPro IPR009061:IPR000551; KEGG: bcv:Bcav_2099 transcriptional regulator, MerR family; SMART: regulatory protein MerR; SPTR: C5C6E6 Transcriptional regulator, MerR family.
  
     0.644
Arch_0204
KEGG: bcv:Bcav_3525 hypothetical protein; SPTR: C5C2S3 Putative uncharacterized protein.
  
     0.643
Arch_0770
KEGG: bcv:Bcav_1933 DNA-binding protein; SPTR: D0WQI5 Putative DNA-binding protein; PFAM: Protein of unknown function (DUF3071).
 
     0.634
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.