STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0784Integrase catalytic region; COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR012337:IPR001584:IPR002514; KEGG: cur:cur_1459 transposase for insertion sequence; PFAM: Integrase catalytic region; transposase IS3/IS911 family protein; SPTR: Q8RMK1 Transposase subunit B; PFAM: Integrase core domain. (408 aa)    
Predicted Functional Partners:
Arch_0785
Transposase IS3/IS911 family protein; InterPro IPR002514; KEGG: kse:Ksed_22010 transposase; PFAM: transposase IS3/IS911 family protein; SPTR: C2BM30 ISMyma01 transposase; PFAM: Transposase.
       0.516
Arch_0786
Integrase catalytic region; COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR012337:IPR001584; KEGG: kse:Ksed_22000 transposase; PFAM: Integrase catalytic region; SPTR: A7B9Y7 Putative uncharacterized protein; PFAM: Integrase core domain.
 
    
0.455
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.