STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0808YodA domain protein; InterPro IPR011038:IPR012674:IPR015304; KEGG: apr:Apre_0499 YodA domain protein; PFAM: YodA domain protein; SPTR: C7RGD5 YodA domain protein; PFAM: YodA. (237 aa)    
Predicted Functional Partners:
Arch_0809
Periplasmic solute binding protein; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006128:IPR006129:IPR006127; KEGG: fma:FMG_0225 zinc ABC transporter substrate-binding protein; PFAM: periplasmic solute binding protein; SPTR: B0S0A8 Zinc ABC transporter substrate-binding protein; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family.
 
 
  0.993
Arch_0810
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003593:IPR003439; KEGG: fma:FMG_0226 zinc ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C2D875 ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter.
 
 
 0.978
Arch_0811
ABC-3 protein; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: apr:Apre_0502 ABC-3 protein; PFAM: ABC-3 protein; SPTR: C2BFU5 ABC superfamily ATP binding cassette transporter, membrane protein; PFAM: ABC 3 transport family.
 
 
 0.976
Arch_0691
Periplasmic solute binding protein; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: gym:GYMC10_3445 periplasmic solute binding protein; PFAM: periplasmic solute binding protein; SPTR: C0W0B1 Metal ABC superfamily ATP binding cassette transporter, binding protein; PFAM: Periplasmic solute binding protein family.
  
 
  0.930
Arch_0690
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: jde:Jden_1534 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D1BF11 ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter.
  
 
 0.904
Arch_0689
ABC-3 protein; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: bcv:Bcav_1773 ABC-3 protein; PFAM: ABC-3 protein; SPTR: C0W322 Metal cation ABC superfamily ATP binding cassette transporter, membrane protein; PFAM: ABC 3 transport family.
  
 
 0.888
Arch_0535
KEGG: nml:Namu_3858 cobalamin synthesis CobW domain protein; SPTR: D1BFN4 Predicted GTPase, G3E family; PFAM: Cobalamin synthesis protein cobW C-terminal domain.
  
  
 0.550
Arch_0143
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: cag:Cagg_3554 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B8G9N9 ABC transporter related; PFAM: ABC transporter.
  
  
 0.543
Arch_0483
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: stp:Strop_2035 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0W5P0 ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter.
  
  
 0.543
Arch_1144
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: rop:ROP_70560 manganese ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0VYA1 ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter.
  
  
 0.543
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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