STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0830InterPro IPR007139; KEGG: bcv:Bcav_2001 protein of unknown function DUF349; PFAM: protein of unknown function DUF349; SPTR: C5C5R5 Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF349). (442 aa)    
Predicted Functional Partners:
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.753
Arch_0771
KEGG: bcv:Bcav_1935 hypothetical protein; SPTR: D0WQI4 Putative uncharacterized protein.
  
     0.749
Arch_1117
Type III restriction protein res subunit; COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR014021:IPR014001:IPR006935; KEGG: art:Arth_2588 type III restriction enzyme, res subunit; PFAM: type III restriction protein res subunit; SMART: DEAD-like helicase; SPTR: D0WNJ0 Putative DNA or RNA helicase of superfamily II; PFAM: Type III restriction enzyme, res subunit.
 
  
 0.737
Arch_0733
KEGG: mlu:Mlut_13380 hypothetical protein; SPTR: D0WQN5 Integral membrane protein.
  
     0.697
Arch_0869
InterPro IPR009061:IPR000551; KEGG: bcv:Bcav_2099 transcriptional regulator, MerR family; SMART: regulatory protein MerR; SPTR: C5C6E6 Transcriptional regulator, MerR family.
  
     0.688
Arch_0772
KEGG: tfu:Tfu_1934 hypothetical protein; SPTR: D0WQI3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3710).
  
     0.655
Arch_0831
COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: kse:Ksed_15250 Zn-dependent hydrolase, glyoxylase; SPTR: D0WQE0 Metallo-beta-lactamase family protein; PFAM: Metallo-beta-lactamase superfamily.
  
    0.644
Arch_0204
KEGG: bcv:Bcav_3525 hypothetical protein; SPTR: C5C2S3 Putative uncharacterized protein.
  
     0.603
Arch_0829
KEGG: bfa:Bfae_14020 hypothetical protein; SPTR: C7MCC6 Putative uncharacterized protein.
       0.589
Arch_1622
Cold-shock DNA-binding domain protein; COGs: COG1278 Cold shock protein; InterPro IPR011129:IPR016027:IPR002059:IPR012340; KEGG: bcv:Bcav_0848 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: D0WJT4 Cold-shock domain protein; PFAM: 'Cold-shock' DNA-binding domain.
  
   0.584
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.