STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0864COGs: COG2378 transcriptional regulator protein; KEGG: kse:Ksed_13990 predicted transcriptional regulator; SPTR: D0WMX0 Putative uncharacterized protein. (301 aa)    
Predicted Functional Partners:
Arch_0865
Hypothetical protein; KEGG: tcu:Tcur_2317 transcriptional regulator-like protein; SPTR: D0WMW9 Putative uncharacterized protein.
 
     0.942
Arch_0866
DEAD/DEAH box helicase domain protein; COGs: COG4581 Superfamily II RNA helicase; InterProIPR014001:IPR001650:IPR014021:IPR011545:IPR 012961; KEGG: ace:Acel_1206 DSH domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DSH domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: D0WMW7 ATP-dependent RNA helicase, DEAD/DEAH box family; PFAM: Helicase conserved C-terminal domain; DSHCT (NUC185) domain; DEAD/DEAH box helicase.
       0.800
Arch_0374
KEGG: bcv:Bcav_1331 hypothetical protein; SPTR: D0WRU5 Putative uncharacterized protein (Fragment).
  
     0.764
Arch_1068
InterPro IPR011251; KEGG: bcv:Bcav_1628 hypothetical protein; SPTR: D0WNB4 Nitrilotriacetate monooxygenase.
  
     0.761
Arch_0255
KEGG: xce:Xcel_2983 hypothetical protein; SPTR: D1BZ92 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3180).
  
     0.737
Arch_0223
KEGG: bcv:Bcav_3418 hypothetical protein; SPTR: C5C235 Putative uncharacterized protein.
  
     0.734
Arch_0413
InterPro IPR003838; KEGG: bcv:Bcav_2825 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: C5V906 ABC transporter integral membrane protein; PFAM: Predicted permease.
  
     0.732
Arch_1417
Lipoprotein LpqB, GerMN domain protein; InterPro IPR019606:IPR018910; KEGG: bcv:Bcav_1242 lipoprotein LpqB; PFAM: Lipoprotein LpqB, GerMN domain; Lipoprotein LpqB, beta-propeller domain-like; SPTR: D0WPH3 Putative lipoprotein LpqB; PFAM: Lipoprotein LpqB beta-propeller domain; Sporulation and spore germination.
  
    0.720
Arch_0777
Hypothetical protein; KEGG: tcu:Tcur_1714 putative aminoacid/polyamine transporter, permease protein; SPTR: D0WQH7 Putative integral membrane protein.
 
     0.711
Arch_1611
SAF domain protein; InterPro IPR013974; KEGG: bcv:Bcav_0901 SAF domain protein; PFAM: SAF domain protein; SPTR: D0WJR4 Flp pilus assembly protein CpaB family protein; PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB.
  
     0.707
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.