STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0890YCII-related protein; InterPro IPR011008:IPR005545; KEGG: bcv:Bcav_2180 YCII-related protein; PFAM: YCII-related; SPTR: D0WMS4 Putative YCII-related domain protein; PFAM: YCII-related domain. (92 aa)    
Predicted Functional Partners:
uvrA
Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.631
Arch_0163
Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196:IPR001958; KEGG: kse:Ksed_04650 arabinose efflux permease family protein; PFAM: major facilitator superfamily MFS_1; SPTR: C5VDV5 Permease, major facilitator family; PFAM: Major Facilitator Superfamily.
  
     0.473
Arch_1258
InterPro IPR003998; KEGG: art:Arth_2793 hypothetical protein; SPTR: D0YUR5 Putative uncharacterized protein.
  
    0.438
Arch_1229
COGs: COG3173 aminoglycoside phosphotransferase; InterPro IPR011009:IPR002575; KEGG: bcv:Bcav_2900 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: D0WNM2 Putative phosphotransferase; PFAM: Phosphotransferase enzyme family.
  
     0.435
Arch_0138
KEGG: jde:Jden_2483 hypothetical protein; SPTR: D0WKD9 Putative membrane protein.
  
     0.434
Arch_0343
InterPro IPR013831:IPR013830; KEGG: xce:Xcel_2490 acyl-CoA thioesterase I precursor; SPTR: D0WRR1 Putative lipolytic enzyme, G-D-S-L.
  
     0.431
pheT
COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterProIPR020825:IPR005121:IPR016027:IPR009061:IPR 004532:IPR002547:IPR012340:IPR005147:IPR005146; KEGG: jde:Jden_1109 phenylalanyl-tRNA synthetase, beta subunit; PFAM: B3/4 domain protein; t-RNA-binding domain protein; tRNA synthetase B5; ferredoxin-fold anticodon-binding; SPTR: D0WN31 Phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synt [...]
  
    0.427
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.