STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0924Band 7 protein; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001972:IPR018080:IPR001107; KEGG: bcv:Bcav_2313 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: D0WML4 Band 7 protein; PFAM: SPFH domain / Band 7 family. (352 aa)    
Predicted Functional Partners:
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.971
Arch_0925
Protein of unknown function DUF107; COGs: COG1585 Membrane protein implicated in regulation of membrane protease activity; InterPro IPR002810; KEGG: jde:Jden_1178 protein of unknown function DUF107; PFAM: protein of unknown function DUF107; SPTR: D0WML2 Putative integral membrane protein; PFAM: NfeD-like.
 
  
 0.956
Arch_0097
Rhomboid family protein; COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: jde:Jden_0165 rhomboid family protein; PFAM: Rhomboid family protein; SPTR: A7BB19 Putative uncharacterized protein; PFAM: Rhomboid family.
   
 0.865
Arch_0923
tRNA/rRNA methyltransferase (SpoU); COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: krh:KRH_12470 RNA methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: C0W340 rRNA methyltransferase; PFAM: SpoU rRNA Methylase family.
  
   0.690
Arch_0926
ABC transporter related protein; COGs: COG1119 ABC-type molybdenum transport system ATPase component/photorepair protein PhrA; InterPro IPR017871:IPR003593:IPR003439; KEGG: jde:Jden_1177 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D0WML1 ABC transporter, ATP-binding protein; PFAM: ABC transporter.
       0.631
arc
AAA ATPase central domain protein; COGs: COG1222 ATP-dependent 26S proteasome regulatory subunit; InterPro IPR003960:IPR003593:IPR003959; KEGG: xce:Xcel_1485 AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: C1RM61 ATP-dependent 26S proteasome regulatory subunit; PFAM: ATPase family associated with various cellular activities (AAA).
   
 
 0.582
Arch_0927
Glycogen synthase; COGs: COG0438 Glycosyltransferase; InterPro IPR019793:IPR011875:IPR001296; KEGG: bcv:Bcav_2317 glycogen synthase; PFAM: glycosyl transferase group 1; SPTR: D0WML0 Glycogen synthase; TIGRFAM: glycogen synthase; PFAM: Glycosyl transferases group 1; TIGRFAM: glycogen synthase, Corynebacterium family.
       0.519
Arch_0336
COGs: COG4877 conserved hypothetical protein; KEGG: ami:Amir_1210 hypothetical protein; SPTR: C6WRB0 Putative uncharacterized protein.
  
  
 0.512
Arch_0608
GCN5-related N-acetyltransferase; COGs: COG3393 acetyltransferase; InterPro IPR016181:IPR000182; KEGG: bcv:Bcav_2497 GCN5-related protein N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: D0WR27 Acetyltransferase, GNAT family protein; PFAM: Acetyltransferase (GNAT) family.
  
    0.483
Arch_0146
Iron (metal) dependent repressor, DtxR family; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367:IPR007167:IPR011991:IPR008988; KEGG: bfa:Bfae_31300 Mn-dependent transcriptional regulator; PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor; SPTR: C7MB03 Mn-dependent transcriptional regulator; PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain.
   
    0.463
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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